Index _ | A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Z _ __call__() (scico.custom_jvp method) (scico.custom_vjp method) (scico.denoiser.DnCNN method) (scico.flax.blocks.ConvBlock method) (scico.flax.blocks.ConvBNBlock method) (scico.flax.blocks.ConvBNMultiBlock method) (scico.flax.blocks.ConvBNPoolBlock method) (scico.flax.blocks.ConvBNUpsampleBlock method) (scico.flax.ConvBNNet method) (scico.flax.DnCNNNet method) (scico.flax.examples.data_preprocessing.CenterCrop method) (scico.flax.examples.data_preprocessing.PositionalCrop method) (scico.flax.examples.data_preprocessing.RandomNoise method) (scico.flax.FlaxMap method) (scico.flax.inverse.ODPGrDescBlock method) (scico.flax.inverse.ODPProxDcnvBlock method) (scico.flax.inverse.ODPProxDnBlock method) (scico.flax.MoDLNet method) (scico.flax.ODPNet method) (scico.flax.ResNet method) (scico.flax.train.spectral.CNN method) (scico.flax.UNet method) (scico.function.Function method) (scico.functional.AnisotropicTVNorm method) (scico.functional.Functional method) (scico.functional.HuberNorm method) (scico.functional.L0Norm method) (scico.functional.L1MinusL2Norm method) (scico.functional.L1Norm method) (scico.functional.L21Norm method) (scico.functional.L2BallIndicator method) (scico.functional.L2Norm method) (scico.functional.NonNegativeIndicator method) (scico.functional.NuclearNorm method) (scico.functional.ProximalAverage method) (scico.functional.ScaledFunctional method) (scico.functional.SeparableFunctional method) (scico.functional.SetDistance method) (scico.functional.SquaredL2Norm method) (scico.functional.SquaredSetDistance method) (scico.functional.ZeroFunctional method) (scico.linop.LinearOperator method) (scico.linop.MatrixOperator method) (scico.linop.xray.svmbir.SVMBIRExtendedLoss method) (scico.loss.Loss method) (scico.loss.PoissonLoss method) (scico.loss.SquaredL2AbsLoss method) (scico.loss.SquaredL2Loss method) (scico.loss.SquaredL2SquaredAbsLoss method) (scico.operator.Operator method) A AbelTransform (class in scico.linop.abel) Abs (class in scico.operator) abs() (in module scico.numpy) absolute() (in module scico.numpy) AcceleratedPGM (class in scico.optimize) accuracy() (scico.solver.ConvATADSolver method) (scico.solver.MatrixATADSolver method) act (scico.flax.DnCNNNet attribute) AdaptiveBBStepSize (class in scico.optimize.pgm) add() (in module scico.numpy) adequate_sampling() (scico.linop.optics.AngularSpectrumPropagator method) (scico.linop.optics.FraunhoferPropagator method) (scico.linop.optics.FresnelPropagator method) adj() (scico.linop.LinearOperator method) (scico.linop.MatrixOperator method) ADMM (class in scico.optimize) all() (in module scico.numpy) (scico.numpy.BlockArray method) allclose() (in module scico.numpy) amax() (in module scico.numpy) amin() (in module scico.numpy) Angle (class in scico.operator) angle() (in module scico.numpy) AngularSpectrumPropagator (class in scico.linop.optics) AnisotropicTVNorm (class in scico.functional) any() (in module scico.numpy) (scico.numpy.BlockArray method) append() (in module scico.numpy) apply_along_axis() (in module scico.numpy) apply_fn() (in module scico.flax.train.apply) apply_over_axes() (in module scico.numpy) arange() (in module scico.numpy) arccos() (in module scico.numpy) arccosh() (in module scico.numpy) arcsin() (in module scico.numpy) arcsinh() (in module scico.numpy) arctan() (in module scico.numpy) arctan2() (in module scico.numpy) arctanh() (in module scico.numpy) argmax() (in module scico.numpy) (scico.numpy.BlockArray method) argmin() (in module scico.numpy) (scico.numpy.BlockArray method) argpartition() (scico.numpy.BlockArray method) argsort() (in module scico.numpy) (scico.numpy.BlockArray method) ArgumentStruct (class in scico.flax.train.diagnostics) argwhere() (in module scico.numpy) around() (in module scico.numpy) array() (in module scico.numpy) array_equal() (in module scico.numpy) array_equiv() (in module scico.numpy) array_repr() (in module scico.numpy) array_split() (in module scico.numpy) array_str() (in module scico.numpy) ArrayIndex (in module scico.typing) asarray() (in module scico.numpy) assert_() (in module scico.numpy.testing) assert_allclose() (in module scico.numpy.testing) assert_almost_equal() (in module scico.numpy.testing) assert_approx_equal() (in module scico.numpy.testing) assert_array_almost_equal() (in module scico.numpy.testing) assert_array_almost_equal_nulp() (in module scico.numpy.testing) assert_array_compare() (in module scico.numpy.testing) assert_array_equal() (in module scico.numpy.testing) assert_array_less() (in module scico.numpy.testing) assert_array_max_ulp() (in module scico.numpy.testing) assert_equal() (in module scico.numpy.testing) assert_no_gc_cycles() (in module scico.numpy.testing) assert_no_warnings() (in module scico.numpy.testing) assert_raises() (in module scico.numpy.testing) assert_raises_regex() (in module scico.numpy.testing) assert_string_equal() (in module scico.numpy.testing) assert_warns() (in module scico.numpy.testing) astype() (scico.numpy.BlockArray method) atleast_1d() (in module scico.numpy) atleast_2d() (in module scico.numpy) atleast_3d() (in module scico.numpy) average() (in module scico.numpy) Axes (in module scico.typing) AxisIndex (in module scico.typing) B ball() (in module scico.random) bartlett() (in module scico.numpy) BasicFlaxTrainer (class in scico.flax) batch_op_adj() (scico.flax.inverse.ODPGrDescBlock method) (scico.flax.inverse.ODPProxDcnvBlock method) (scico.flax.inverse.ODPProxDnBlock method) BBStepSize (class in scico.optimize.pgm) bernoulli() (in module scico.random) beta() (in module scico.random) betainc() (in module scico.scipy.special) BiConvolve (class in scico.operator) bincount() (in module scico.numpy) bisect() (in module scico.solver) bits() (in module scico.random) blackman() (in module scico.numpy) block() (in module scico.numpy) block_until_ready() (scico.numpy.BlockArray method) BlockArray (class in scico.numpy) blockarray() (in module scico.numpy) (scico.numpy.BlockArray static method) BlockShape (in module scico.typing) BM3D (class in scico.functional) bm3d() (in module scico.denoiser) BM4D (class in scico.functional) bm4d() (in module scico.denoiser) break_cycles() (in module scico.numpy.testing) broadcast() (scico.numpy.BlockArray method) broadcast_arrays() (in module scico.numpy) broadcast_in_dim() (scico.numpy.BlockArray method) broadcast_nested_shapes() (in module scico.numpy.util) broadcast_shapes() (in module scico.numpy) broadcast_to() (in module scico.numpy) bsnr() (in module scico.metric) build_blur_kernel() (in module scico.flax.examples.data_preprocessing) build_err_msg() (in module scico.numpy.testing) build_image_dataset() (in module scico.flax.examples.data_preprocessing) C can_cast() (in module scico.numpy) categorical() (in module scico.random) cauchy() (in module scico.random) cbrt() (in module scico.numpy) ceil() (in module scico.numpy) CenterCrop (class in scico.flax.examples.data_preprocessing) cg() (in module scico.solver) cg_solver() (in module scico.flax.inverse) check_for_tracer() (in module scico.util) check_if_stackable() (scico.operator.DiagonalStack static method) (scico.operator.VerticalStack static method) check_img_data_requirements() (in module scico.flax.examples.examples) checkpoint() (scico.flax.BasicFlaxTrainer method) checkpoint_restore() (in module scico.flax.train.checkpoints) checkpoint_save() (in module scico.flax.train.checkpoints) chisquare() (in module scico.random) choice() (in module scico.random) cholesky() (in module scico.numpy.linalg) choose() (in module scico.numpy) (scico.numpy.BlockArray method) CircularConvolve (class in scico.linop) CircularConvolveSolver (class in scico.optimize.admm) clip() (in module scico.numpy) (scico.numpy.BlockArray method) clip_positive() (in module scico.flax.train.traversals) clip_range() (in module scico.flax.train.traversals) clone() (scico.numpy.BlockArray method) close() (in module scico.plot) CNN (class in scico.flax.train.spectral) column_stack() (in module scico.numpy) complex_dtype() (in module scico.numpy.util) ComposedLinearOperator (class in scico.linop) compress() (in module scico.numpy) (scico.numpy.BlockArray method) compute_metrics() (in module scico.flax.train.diagnostics) compute_rhs() (scico.optimize.admm.G0BlockCircularConvolveSolver method) (scico.optimize.admm.LinearSubproblemSolver method) concatenate() (in module scico.numpy) cond() (in module scico.numpy.linalg) config_notebook_plotting() (in module scico.plot) ConfigDict (class in scico.flax) ConfigImageSetDict (class in scico.flax.examples.typed_dict) configure_reporting() (scico.flax.BasicFlaxTrainer method) configure_steps() (scico.flax.BasicFlaxTrainer method) configure_training_functions() (scico.flax.BasicFlaxTrainer method) conj() (in module scico.numpy) (scico.linop.Diagonal method) (scico.linop.LinearOperator method) (scico.linop.MatrixOperator method) (scico.numpy.BlockArray method) conj_prox() (scico.functional.Functional method) conjugate() (in module scico.numpy) (scico.numpy.BlockArray method) const (scico.loss.PoissonLoss attribute) construct_data_iterators() (scico.flax.BasicFlaxTrainer method) construct_traversal() (in module scico.flax.train.traversals) ContextTimer (class in scico.util) contour() (in module scico.plot) conv() (in module scico.flax.train.spectral) ConvATADSolver (class in scico.solver) ConvBlock (class in scico.flax.blocks) ConvBNBlock (class in scico.flax.blocks) ConvBNMultiBlock (class in scico.flax.blocks) ConvBNNet (class in scico.flax) ConvBNPoolBlock (class in scico.flax.blocks) ConvBNUpsampleBlock (class in scico.flax.blocks) Convolve (class in scico.linop) convolve() (in module scico.numpy) copy() (in module scico.numpy) (scico.numpy.BlockArray method) copysign() (in module scico.numpy) cos() (in module scico.numpy) cosh() (in module scico.numpy) count_nonzero() (in module scico.numpy) count_parameters() (in module scico.flax) create_3d_foam_phantom() (in module scico.examples) create_basic_train_state() (in module scico.flax.train.state) create_circular_phantom() (in module scico.examples) create_cnst_lr_schedule() (in module scico.flax.train.learning_rate) create_cone() (in module scico.examples) create_conv_sparse_phantom() (in module scico.examples) create_cosine_lr_schedule() (in module scico.flax.train.learning_rate) create_exp_lr_schedule() (in module scico.flax.train.learning_rate) create_input_iter() (in module scico.flax) create_tangle_phantom() (in module scico.examples) Crop (class in scico.linop) cross() (in module scico.numpy) cross_replica_mean() (in module scico.flax.train.trainer) CTDataSetDict (class in scico.flax.examples.typed_dict) cumprod() (in module scico.numpy) (scico.numpy.BlockArray method) cumsum() (in module scico.numpy) (scico.numpy.BlockArray method) custom_jvp (class in scico) custom_vjp (class in scico) cvjp() (in module scico) D DataSetDict (class in scico.flax.train.typed_dict) decorate_methods() (in module scico.numpy.testing) define_parallel_training_functions() (scico.flax.BasicFlaxTrainer method) defjvp() (scico.custom_jvp method) defjvps() (scico.custom_jvp method) defvjp() (scico.custom_vjp method) deg2rad() (in module scico.numpy) degrees() (in module scico.numpy) delete() (in module scico.numpy) (scico.numpy.BlockArray method) device_info() (in module scico.util) DFT (class in scico.linop) diag() (in module scico.numpy) diag_indices() (in module scico.numpy) diag_indices_from() (in module scico.numpy) diagflat() (in module scico.numpy) Diagonal (class in scico.linop) diagonal() (scico.numpy.BlockArray method) DiagonalStack (class in scico.linop) (class in scico.operator) diff() (in module scico.numpy) digamma() (in module scico.scipy.special) dirichlet() (in module scico.random) distributed_data_generation() (in module scico.flax.examples.data_generation) divide() (in module scico.numpy) divmod() (in module scico.numpy) DnCNN (class in scico.denoiser) (class in scico.functional) DnCNNNet (class in scico.flax) dot() (in module scico.numpy) (scico.numpy.BlockArray method) double_sided_maxwell() (in module scico.random) downsample_volume() (in module scico.examples) dsplit() (in module scico.numpy) dstack() (in module scico.numpy) DType (in module scico.typing) dtype (scico.numpy.BlockArray property) dx (scico.linop.optics.AngularSpectrumPropagator attribute) (scico.linop.optics.FraunhoferPropagator attribute) (scico.linop.optics.FresnelPropagator attribute) (scico.linop.optics.Propagator attribute) dx_D (scico.linop.optics.FraunhoferPropagator attribute) E ediff1d() (in module scico.numpy) eig() (in module scico.numpy.linalg) eigh() (in module scico.numpy.linalg) eigvals() (in module scico.numpy.linalg) eigvalsh() (in module scico.numpy.linalg) einsum() (in module scico.numpy) einsum_path() (in module scico.numpy) elapsed() (scico.util.ContextTimer method) (scico.util.Timer method) empty() (in module scico.numpy) empty_like() (in module scico.numpy) end() (scico.diagnostics.IterationStats method) ensure_writeable() (in module scico.linop.xray.astra) entr() (in module scico.scipy.special) epfl_deconv_data() (in module scico.examples) equal() (in module scico.numpy) erf() (in module scico.scipy.special) erfc() (in module scico.scipy.special) erfinv() (in module scico.scipy.special) estimate_parameters() (scico.optimize.NonLinearPADMM static method) (scico.optimize.PDHG static method) (scico.optimize.ProximalADMM static method) estimate_spectral_norm() (in module scico.flax.train.spectral) eval_step() (in module scico.flax.train.steps) exact_spectral_norm() (in module scico.flax.train.spectral) Exp (class in scico.operator) exp() (in module scico.numpy) exp1() (in module scico.scipy.special) exp2() (in module scico.numpy) expand_dims() (in module scico.numpy) expit() (in module scico.scipy.special) expm1() (in module scico.numpy) exponential() (in module scico.random) extract() (in module scico.numpy) eye() (in module scico.numpy) F f() (in module scico.random) f_quad_approx() (scico.optimize.PGM method) fabs() (in module scico.numpy) FBlockCircularConvolveSolver (class in scico.optimize.admm) fbp() (scico.linop.xray.astra.XRayTransform method) fft() (in module scico.numpy.fft) fft2() (in module scico.numpy.fft) fftfreq() (in module scico.numpy.fft) fftn() (in module scico.numpy.fft) fftshift() (in module scico.numpy.fft) FiniteDifference (class in scico.linop) fit() (scico.ray.tune.Tuner method) fix() (in module scico.numpy) flatnonzero() (in module scico.numpy) flatten() (scico.numpy.BlockArray method) flatten_dict() (in module scico.flax.train.clu_utils) FlaxMap (class in scico.flax) flip() (in module scico.flax.examples.data_preprocessing) (in module scico.numpy) fliplr() (in module scico.numpy) flipud() (in module scico.numpy) float_power() (in module scico.numpy) floor() (in module scico.numpy) floor_divide() (in module scico.numpy) fmax() (in module scico.numpy) fmin() (in module scico.numpy) fmod() (in module scico.numpy) FraunhoferPropagator (class in scico.linop.optics) freeze() (scico.operator.BiConvolve method) (scico.operator.Operator method) FresnelPropagator (class in scico.linop.optics) frexp() (in module scico.numpy) from_dlpack() (in module scico.numpy) from_operator() (scico.linop.CircularConvolve static method) frombuffer() (in module scico.numpy) fromfile() (in module scico.numpy) fromfunction() (in module scico.numpy) fromiter() (in module scico.numpy) fromstring() (in module scico.numpy) full() (in module scico.numpy) full_like() (in module scico.numpy) Function (class in scico.function) Functional (class in scico.functional) G G0BlockCircularConvolveSolver (class in scico.optimize.admm) gamma() (in module scico.random) (in module scico.scipy.special) gammainc() (in module scico.scipy.special) gammaincc() (in module scico.scipy.special) gammaln() (in module scico.scipy.special) gaussian() (in module scico.examples) gcd() (in module scico.numpy) generalized_normal() (in module scico.random) generate_blur_data() (in module scico.flax.examples.data_generation) generate_ct_data() (in module scico.flax.examples.data_generation) generate_foam1_images() (in module scico.flax.examples.data_generation) generate_foam2_images() (in module scico.flax.examples.data_generation) GenericSubproblemSolver (class in scico.optimize.admm) geometric() (in module scico.random) geomspace() (in module scico.numpy) get_bsds_data() (in module scico.flax.examples.data_preprocessing) get_cache_path() (in module scico.flax.examples.examples) get_epfl_deconv_data() (in module scico.examples) get_image_quadrants() (in module scico.linop.abel) get_parameter_overview() (in module scico.flax.train.clu_utils) get_parameter_rows() (in module scico.flax.train.clu_utils) get_printoptions() (in module scico.numpy) get_ucb_diffusercam_data() (in module scico.examples) global_shards (scico.numpy.BlockArray property) golden() (in module scico.solver) grad() (in module scico) (scico.functional.Functional method) gradient() (in module scico.numpy) gram() (scico.linop.LinearOperator method) (scico.linop.MatrixOperator method) gram_op (scico.linop.Diagonal property) (scico.linop.LinearOperator property) (scico.linop.MatrixOperator property) greater() (in module scico.numpy) greater_equal() (in module scico.numpy) gumbel() (in module scico.random) H H (scico.linop.Diagonal property) (scico.linop.LinearOperator property) (scico.linop.MatrixOperator property) hamming() (in module scico.numpy) hanning() (in module scico.numpy) heaviside() (in module scico.numpy) hessian (scico.loss.SquaredL2Loss property) hessian() (in module scico) hfft() (in module scico.numpy.fft) histogram() (in module scico.numpy) histogram2d() (in module scico.numpy) histogram_bin_edges() (in module scico.numpy) histogramdd() (in module scico.numpy) history() (scico.diagnostics.IterationStats method) hsplit() (in module scico.numpy) hstack() (in module scico.numpy) HuberNorm (class in scico.functional) hypot() (in module scico.numpy) I i0() (in module scico.numpy) (in module scico.scipy.special) i0e() (in module scico.scipy.special) i1() (in module scico.scipy.special) i1e() (in module scico.scipy.special) Identity (class in scico.linop) identity() (in module scico.numpy) ifft() (in module scico.numpy.fft) ifft2() (in module scico.numpy.fft) ifftn() (in module scico.numpy.fft) ifftshift() (in module scico.numpy.fft) ihfft() (in module scico.numpy.fft) imag (scico.numpy.BlockArray property) imag() (in module scico.numpy) images_read() (in module scico.flax.examples.data_preprocessing) imview() (in module scico.plot) in1d() (in module scico.numpy) indexed_shape() (in module scico.numpy.util) indices() (in module scico.numpy) initialize() (in module scico.flax.train.state) initialize_training_state() (scico.flax.BasicFlaxTrainer method) inner() (in module scico.numpy) insert() (in module scico.numpy) (scico.diagnostics.IterationStats method) internal_init() (scico.optimize.admm.CircularConvolveSolver method) (scico.optimize.admm.FBlockCircularConvolveSolver method) (scico.optimize.admm.G0BlockCircularConvolveSolver method) (scico.optimize.admm.LinearSubproblemSolver method) (scico.optimize.admm.MatrixSubproblemSolver method) (scico.optimize.admm.SubproblemSolver method) (scico.optimize.pgm.PGMStepSize method) interp() (in module scico.numpy) intersect1d() (in module scico.numpy) inv() (in module scico.numpy.linalg) (scico.linop.DFT method) inverse() (scico.linop.abel.AbelTransform method) irfft() (in module scico.numpy.fft) irfft2() (in module scico.numpy.fft) irfftn() (in module scico.numpy.fft) is_arraylike() (in module scico.numpy.util) is_complex_dtype() (in module scico.numpy.util) is_deleted() (scico.numpy.BlockArray method) is_nested() (in module scico.numpy.util) is_ready() (scico.numpy.BlockArray method) is_real_dtype() (in module scico.numpy.util) is_scalar_equiv() (in module scico.numpy.util) isclose() (in module scico.numpy) iscomplex() (in module scico.numpy) iscomplexobj() (in module scico.numpy) isfinite() (in module scico.numpy) isin() (in module scico.numpy) isinf() (in module scico.numpy) isnan() (in module scico.numpy) isneginf() (in module scico.numpy) isnr() (in module scico.metric) isposinf() (in module scico.numpy) isreal() (in module scico.numpy) isrealobj() (in module scico.numpy) isscalar() (in module scico.numpy) issubdtype() (in module scico.numpy) issubsctype() (in module scico.numpy) item() (scico.numpy.BlockArray method) itemsize (scico.numpy.BlockArray property) iterable() (in module scico.numpy) IterateData (class in scico.flax.train.input_pipeline) IterationStats (class in scico.diagnostics) ix_() (in module scico.numpy) J jacfwd() (in module scico) jacobian() (in module scico.linop) (scico.function.Function method) jacrev() (in module scico) jiffies() (in module scico.numpy.testing) jit() (scico.linop.LinearOperator method) (scico.operator.Operator method) join() (scico.function.Function method) jvp() (in module scico) (scico.function.Function method) (scico.operator.Operator method) K k0 (scico.linop.optics.AngularSpectrumPropagator attribute) (scico.linop.optics.FraunhoferPropagator attribute) (scico.linop.optics.FresnelPropagator attribute) (scico.linop.optics.Propagator attribute) kaiser() (in module scico.numpy) kodim23() (in module scico.data) kp (scico.linop.optics.Propagator attribute) kron() (in module scico.numpy) L L (scico.linop.optics.AngularSpectrumPropagator attribute) (scico.linop.optics.FraunhoferPropagator attribute) (scico.linop.optics.FresnelPropagator attribute) (scico.linop.optics.Propagator attribute) L0Norm (class in scico.functional) L1MinusL2Norm (class in scico.functional) L1Norm (class in scico.functional) L21Norm (class in scico.functional) L2BallIndicator (class in scico.functional) L2Norm (class in scico.functional) L_D (scico.linop.optics.FraunhoferPropagator attribute) labels() (scico.util.Timer method) laplace() (in module scico.random) lcm() (in module scico.numpy) ldexp() (in module scico.numpy) less() (in module scico.numpy) less_equal() (in module scico.numpy) lexsort() (in module scico.numpy) linear_adjoint() (in module scico) linearize() (in module scico) LinearizedADMM (class in scico.optimize) LinearOperator (class in scico.linop) LinearSubproblemSolver (class in scico.optimize.admm) LineSearchStepSize (class in scico.optimize.pgm) linop_from_function() (in module scico.linop) linspace() (in module scico.numpy) load() (in module scico.numpy) load_ct_data() (in module scico.flax.examples.examples) load_foam1_blur_data() (in module scico.flax.examples.examples) load_image_data() (in module scico.flax.examples.examples) load_weights() (in module scico.flax) log() (in module scico.numpy) (scico.flax.BasicFlaxTrainer method) log10() (in module scico.numpy) log1p() (in module scico.numpy) log2() (in module scico.numpy) loggamma() (in module scico.random) logical_and() (in module scico.numpy) logical_not() (in module scico.numpy) logical_or() (in module scico.numpy) logical_xor() (in module scico.numpy) logistic() (in module scico.random) logspace() (in module scico.numpy) Loss (class in scico.loss) lpmn() (in module scico.scipy.special) lpmn_values() (in module scico.scipy.special) lstsq() (in module scico.numpy.linalg) (in module scico.solver) M mae() (in module scico.metric) make_table() (in module scico.flax.train.clu_utils) mask_indices() (in module scico.numpy) matmul() (in module scico.numpy) matrix_power() (in module scico.numpy.linalg) matrix_rank() (in module scico.numpy.linalg) matrix_transpose() (in module scico.numpy) MatrixATADSolver (class in scico.solver) MatrixOperator (class in scico.linop) MatrixSubproblemSolver (class in scico.optimize.admm) max() (in module scico.numpy) (scico.numpy.BlockArray method) maximum() (in module scico.numpy) maxwell() (in module scico.random) mean() (in module scico.numpy) (scico.numpy.BlockArray method) measure() (in module scico.numpy.testing) memusage() (in module scico.numpy.testing) meshgrid() (in module scico.numpy) MetricsDict (class in scico.flax.train.typed_dict) min() (in module scico.numpy) (scico.numpy.BlockArray method) minimize() (in module scico.solver) minimize_scalar() (in module scico.solver) minimizer() (scico.optimize.ADMM method) (scico.optimize.LinearizedADMM method) (scico.optimize.Optimizer method) (scico.optimize.PDHG method) (scico.optimize.PGM method) (scico.optimize.ProximalADMMBase method) minimum() (in module scico.numpy) mod() (in module scico.numpy) ModelVarDict (class in scico.flax.train.typed_dict) modf() (in module scico.numpy) MoDLNet (class in scico.flax) module scico scico.data scico.denoiser scico.diagnostics scico.examples scico.flax scico.flax.blocks scico.flax.examples scico.flax.examples.data_generation scico.flax.examples.data_preprocessing scico.flax.examples.examples scico.flax.examples.typed_dict scico.flax.inverse scico.flax.train scico.flax.train.apply scico.flax.train.checkpoints scico.flax.train.clu_utils scico.flax.train.diagnostics scico.flax.train.input_pipeline scico.flax.train.learning_rate scico.flax.train.losses scico.flax.train.spectral scico.flax.train.state scico.flax.train.steps scico.flax.train.trainer scico.flax.train.traversals scico.flax.train.typed_dict scico.function scico.functional scico.linop scico.linop.abel scico.linop.optics scico.linop.xray scico.linop.xray.astra scico.linop.xray.svmbir scico.loss scico.metric scico.numpy scico.numpy.fft scico.numpy.linalg scico.numpy.testing scico.numpy.util scico.operator scico.operator.biconvolve scico.optimize scico.optimize.admm scico.optimize.pgm scico.plot scico.random scico.ray scico.ray.tune scico.scipy scico.scipy.special scico.solver scico.typing scico.util moveaxis() (in module scico.numpy) mse() (in module scico.metric) mse_loss() (in module scico.flax.train.losses) mT (scico.numpy.BlockArray property) multi_dot() (in module scico.numpy.linalg) multigammaln() (in module scico.scipy.special) multiply() (in module scico.numpy) multivariate_normal() (in module scico.random) N nan_to_num() (in module scico.numpy) nanargmax() (in module scico.numpy) nanargmin() (in module scico.numpy) nancumprod() (in module scico.numpy) nancumsum() (in module scico.numpy) nanmax() (in module scico.numpy) nanmin() (in module scico.numpy) nanprod() (in module scico.numpy) nansum() (in module scico.numpy) nbytes (scico.numpy.BlockArray property) ndim() (in module scico.numpy) ndtr() (in module scico.scipy.special) ndtri() (in module scico.scipy.special) negative() (in module scico.numpy) nextafter() (in module scico.numpy) no_nan_divide() (in module scico.numpy.util) NonLinearPADMM (class in scico.optimize) NonNegativeIndicator (class in scico.functional) nonzero() (in module scico.numpy) (scico.numpy.BlockArray method) norm() (in module scico.numpy.linalg) (scico.linop.Diagonal method) (scico.linop.MatrixOperator method) norm_dual_residual() (scico.optimize.ADMM method) (scico.optimize.LinearizedADMM method) (scico.optimize.NonLinearPADMM method) (scico.optimize.PDHG method) (scico.optimize.ProximalADMM method) norm_primal_residual() (scico.optimize.ADMM method) (scico.optimize.LinearizedADMM method) (scico.optimize.NonLinearPADMM method) (scico.optimize.PDHG method) (scico.optimize.ProximalADMM method) norm_residual() (scico.optimize.PGM method) normal() (in module scico.random) not_equal() (in module scico.numpy) NuclearNorm (class in scico.functional) O objective() (scico.optimize.ADMM method) (scico.optimize.LinearizedADMM method) (scico.optimize.PDHG method) (scico.optimize.PGM method) (scico.optimize.ProximalADMMBase method) odp_block (scico.flax.ODPNet attribute) ODPGrDescBlock (class in scico.flax.inverse) ODPNet (class in scico.flax) ODPProxDcnvBlock (class in scico.flax.inverse) ODPProxDnBlock (class in scico.flax.inverse) on_device_size_in_bytes() (scico.numpy.BlockArray method) ones() (in module scico.numpy) ones_like() (in module scico.numpy) only_apply() (in module scico.flax) Operator (class in scico.operator) operator_from_function() (in module scico.operator) operator_norm() (in module scico.linop) Optimizer (class in scico.optimize) orthogonal() (in module scico.random) outer() (in module scico.numpy) P Pad (class in scico.linop) pad() (in module scico.numpy) padded_shape (scico.linop.optics.AngularSpectrumPropagator attribute) (scico.linop.optics.FresnelPropagator attribute) (scico.linop.optics.Propagator attribute) PaddedCircularConvolve (class in scico.flax.examples.data_preprocessing) Parallel2dProjector (class in scico.linop) ParamRow (class in scico.flax.train.clu_utils) ParamRowWithStats (class in scico.flax.train.clu_utils) pareto() (in module scico.random) parse_axes() (in module scico.numpy.util) partial() (in module scico.util) partition() (in module scico.numpy) PDHG (class in scico.optimize) PGM (class in scico.optimize) PGMStepSize (class in scico.optimize.pgm) phase_diff() (in module scico.examples) piecewise() (in module scico.numpy) pinv() (scico.linop.optics.AngularSpectrumPropagator method) place() (in module scico.numpy) platform() (scico.numpy.BlockArray method) plot() (in module scico.plot) poisson() (in module scico.random) PoissonLoss (class in scico.loss) polydiv() (in module scico.numpy) polygamma() (in module scico.scipy.special) polymul() (in module scico.numpy) PositionalCrop (class in scico.flax.examples.data_preprocessing) positive() (in module scico.numpy) power() (in module scico.numpy) power_iteration() (in module scico.flax.inverse) (in module scico.linop) prepare_data() (in module scico.flax.train.input_pipeline) preprocess_images() (in module scico.flax.examples.data_preprocessing) print_assert_equal() (in module scico.numpy.testing) print_data_range() (in module scico.flax.examples.examples) print_data_size() (in module scico.flax.examples.examples) print_data_warning() (in module scico.flax.examples.examples) print_info() (in module scico.flax.examples.examples) print_input_path() (in module scico.flax.examples.examples) print_output_path() (in module scico.flax.examples.examples) printoptions() (in module scico.numpy) PRNGKey (in module scico.typing) prod() (in module scico.numpy) (scico.numpy.BlockArray method) project() (scico.linop.Parallel2dProjector method) promote_types() (in module scico.numpy) Propagator (class in scico.linop.optics) prox() (scico.functional.AnisotropicTVNorm method) (scico.functional.BM3D method) (scico.functional.BM4D method) (scico.functional.DnCNN method) (scico.functional.Functional method) (scico.functional.HuberNorm method) (scico.functional.L0Norm static method) (scico.functional.L1MinusL2Norm method) (scico.functional.L1Norm static method) (scico.functional.L21Norm method) (scico.functional.L2BallIndicator method) (scico.functional.L2Norm method) (scico.functional.NonNegativeIndicator method) (scico.functional.NuclearNorm method) (scico.functional.ProximalAverage method) (scico.functional.ScaledFunctional method) (scico.functional.SeparableFunctional method) (scico.functional.SetDistance method) (scico.functional.SquaredL2Norm method) (scico.functional.SquaredSetDistance method) (scico.functional.ZeroFunctional method) (scico.linop.xray.svmbir.SVMBIRExtendedLoss method) (scico.loss.Loss method) (scico.loss.SquaredL2AbsLoss method) (scico.loss.SquaredL2Loss method) (scico.loss.SquaredL2SquaredAbsLoss method) ProximalADMM (class in scico.optimize) ProximalADMMBase (class in scico.optimize) ProximalAverage (class in scico.functional) psnr() (in module scico.metric) ptp() (in module scico.numpy) (scico.numpy.BlockArray method) put() (in module scico.numpy) put_image_quadrants() (in module scico.linop.abel) Q qr() (in module scico.numpy.linalg) R rad2deg() (in module scico.numpy) rademacher() (in module scico.random) radial_transverse_frequency() (in module scico.linop.optics) radians() (in module scico.numpy) raises() (in module scico.numpy.testing) randint() (in module scico.random) randn() (in module scico.random) RandomNoise (class in scico.flax.examples.data_preprocessing) ravel() (in module scico.numpy) (scico.numpy.BlockArray method) ravel_multi_index() (in module scico.numpy) ray_distributed_data_generation() (in module scico.flax.examples.data_generation) rayleigh() (in module scico.random) real (scico.numpy.BlockArray property) real() (in module scico.numpy) real_dtype() (in module scico.numpy.util) reciprocal() (in module scico.numpy) rel_res() (in module scico.metric) remainder() (in module scico.numpy) repeat() (in module scico.numpy) (scico.numpy.BlockArray method) replace() (scico.flax.train.state.TrainState method) reset() (scico.flax.train.input_pipeline.IterateData method) (scico.util.Timer method) Reshape (class in scico.linop) reshape() (in module scico.numpy) (scico.numpy.BlockArray method) resize() (in module scico.numpy) ResNet (class in scico.flax) result_type() (in module scico.numpy) rfft() (in module scico.numpy.fft) rfft2() (in module scico.numpy.fft) rfftfreq() (in module scico.numpy.fft) rfftn() (in module scico.numpy.fft) rgb2gray() (in module scico.examples) rgetattr() (in module scico.util) rint() (in module scico.numpy) RobustLineSearchStepSize (class in scico.optimize.pgm) roll() (in module scico.numpy) rollaxis() (in module scico.numpy) roots() (in module scico.numpy) rot90() (in module scico.numpy) rotation90() (in module scico.flax.examples.data_preprocessing) round() (scico.numpy.BlockArray method) round_() (in module scico.numpy) row_stack() (in module scico.numpy) rsetattr() (in module scico.util) run() (in module scico.ray.tune) run_module_suite() (in module scico.numpy.testing) rundocs() (in module scico.numpy.testing) runstring() (in module scico.numpy.testing) runtime_error_array() (in module scico.flax.examples.examples) runtime_error_scalar() (in module scico.flax.examples.examples) S save() (in module scico.numpy) save_weights() (in module scico.flax) savez() (in module scico.numpy) ScaledFunctional (class in scico.functional) scico module scico.data module scico.denoiser module scico.diagnostics module scico.examples module scico.flax module scico.flax.blocks module scico.flax.examples module scico.flax.examples.data_generation module scico.flax.examples.data_preprocessing module scico.flax.examples.examples module scico.flax.examples.typed_dict module scico.flax.inverse module scico.flax.train module scico.flax.train.apply module scico.flax.train.checkpoints module scico.flax.train.clu_utils module scico.flax.train.diagnostics module scico.flax.train.input_pipeline module scico.flax.train.learning_rate module scico.flax.train.losses module scico.flax.train.spectral module scico.flax.train.state module scico.flax.train.steps module scico.flax.train.trainer module scico.flax.train.traversals module scico.flax.train.typed_dict module scico.function module scico.functional module scico.linop module scico.linop.abel module scico.linop.optics module scico.linop.xray module scico.linop.xray.astra module scico.linop.xray.svmbir module scico.loss module scico.metric module scico.numpy module scico.numpy.fft module scico.numpy.linalg module scico.numpy.testing module scico.numpy.util module scico.operator module scico.operator.biconvolve module scico.optimize module scico.optimize.admm module scico.optimize.pgm module scico.plot module scico.random module scico.ray module scico.ray.tune module scico.scipy module scico.scipy.special module scico.solver module scico.typing module scico.util module searchsorted() (in module scico.numpy) (scico.numpy.BlockArray method) select() (in module scico.numpy) SeparableFunctional (class in scico.functional) set_ipython_plot_backend() (in module scico.plot) set_notebook_plot_backend() (in module scico.plot) set_printoptions() (in module scico.numpy) set_scale() (scico.loss.Loss method) set_training_parameters() (scico.flax.BasicFlaxTrainer method) setdiff1d() (in module scico.numpy) SetDistance (class in scico.functional) setup() (scico.flax.inverse.ODPGrDescBlock method) (scico.flax.inverse.ODPProxDcnvBlock method) setxor1d() (in module scico.numpy) Shape (in module scico.typing) shape() (in module scico.numpy) shape_to_size() (in module scico.numpy.util) sign() (in module scico.numpy) signbit() (in module scico.numpy) sin() (in module scico.numpy) sinc() (in module scico.numpy) SingleAxisFiniteDifference (class in scico.linop) sinh() (in module scico.numpy) size() (in module scico.numpy) Slice (class in scico.linop) slice() (scico.function.Function method) slice_length() (in module scico.numpy.util) slogdet() (in module scico.numpy.linalg) snr() (in module scico.metric) solve() (in module scico.numpy.linalg) (scico.optimize.admm.CircularConvolveSolver method) (scico.optimize.admm.FBlockCircularConvolveSolver method) (scico.optimize.admm.G0BlockCircularConvolveSolver method) (scico.optimize.admm.GenericSubproblemSolver method) (scico.optimize.admm.LinearSubproblemSolver method) (scico.optimize.admm.MatrixSubproblemSolver method) (scico.optimize.Optimizer method) (scico.solver.ConvATADSolver method) (scico.solver.MatrixATADSolver method) sort() (in module scico.numpy) (scico.numpy.BlockArray method) sort_complex() (in module scico.numpy) spectral_normalization_conv() (in module scico.flax.train.spectral) spence() (in module scico.scipy.special) sph_harm() (in module scico.scipy.special) split() (in module scico.numpy) (scico.numpy.BlockArray method) spnoise() (in module scico.examples) sqrt() (in module scico.numpy) square() (in module scico.numpy) SquaredL2AbsLoss (class in scico.loss) SquaredL2Loss (class in scico.loss) SquaredL2Norm (class in scico.functional) SquaredL2SquaredAbsLoss (class in scico.loss) SquaredSetDistance (class in scico.functional) squeeze() (in module scico.numpy) (scico.numpy.BlockArray method) stack() (in module scico.numpy) start() (scico.util.Timer method) stats_obj() (in module scico.flax.train.diagnostics) std() (in module scico.numpy) (scico.numpy.BlockArray method) step() (scico.optimize.AcceleratedPGM method) (scico.optimize.ADMM method) (scico.optimize.LinearizedADMM method) (scico.optimize.NonLinearPADMM method) (scico.optimize.Optimizer method) (scico.optimize.PDHG method) (scico.optimize.PGM method) (scico.optimize.ProximalADMM method) stop() (scico.util.Timer method) SubproblemSolver (class in scico.optimize.admm) subtract() (in module scico.numpy) Sum (class in scico.linop) sum() (in module scico.numpy) (scico.numpy.BlockArray method) surf() (in module scico.plot) svd() (in module scico.numpy.linalg) SVMBIRExtendedLoss (class in scico.linop.xray.svmbir) SVMBIRSquaredL2Loss (class in scico.linop.xray.svmbir) swapaxes() (in module scico.numpy) (scico.numpy.BlockArray method) sync_batch_stats() (in module scico.flax.train.trainer) T T (scico.linop.Diagonal property) (scico.linop.LinearOperator property) (scico.linop.MatrixOperator property) (scico.numpy.BlockArray property) t() (in module scico.random) take() (in module scico.numpy) (scico.numpy.BlockArray method) tan() (in module scico.numpy) tanh() (in module scico.numpy) tempdir() (in module scico.numpy.testing) temppath() (in module scico.numpy.testing) tensordot() (in module scico.numpy) tensorinv() (in module scico.numpy.linalg) tensorsolve() (in module scico.numpy.linalg) tile() (in module scico.numpy) tile_volume_slices() (in module scico.examples) Timer (class in scico.util) to_array() (scico.linop.MatrixOperator method) trace() (in module scico.numpy) (scico.numpy.BlockArray method) train() (scico.flax.BasicFlaxTrainer method) train_step() (in module scico.flax.train.steps) train_step_post() (in module scico.flax.train.steps) TrainState (class in scico.flax.train.state) Transpose (class in scico.linop) transpose() (in module scico.numpy) (scico.numpy.BlockArray method) tri() (in module scico.numpy) tril_indices() (in module scico.numpy) tril_indices_from() (in module scico.numpy) trim_zeros() (in module scico.numpy) triu_indices() (in module scico.numpy) triu_indices_from() (in module scico.numpy) true_divide() (in module scico.numpy) trunc() (in module scico.numpy) truncated_normal() (in module scico.random) Tuner (class in scico.ray.tune) U u_init() (scico.optimize.ADMM method) (scico.optimize.LinearizedADMM method) ucb_diffusercam_data() (in module scico.examples) UNet (class in scico.flax) uniform() (in module scico.random) union1d() (in module scico.numpy) unique() (in module scico.numpy) unravel_index() (in module scico.numpy) unsafe_buffer_pointer() (scico.numpy.BlockArray method) unwrap() (in module scico.numpy) update() (scico.optimize.pgm.AdaptiveBBStepSize method) (scico.optimize.pgm.BBStepSize method) (scico.optimize.pgm.LineSearchStepSize method) (scico.optimize.pgm.PGMStepSize method) (scico.optimize.pgm.RobustLineSearchStepSize method) update_metrics() (scico.flax.BasicFlaxTrainer method) upscale_nn() (in module scico.flax.blocks) url_get() (in module scico.util) V valid_adjoint() (in module scico.linop) value_and_grad() (in module scico) var() (in module scico.numpy) (scico.numpy.BlockArray method) vdot() (in module scico.numpy) vectorize() (in module scico.numpy) VerticalStack (class in scico.linop) (class in scico.operator) view() (scico.numpy.BlockArray method) vjp() (in module scico) (scico.function.Function method) (scico.operator.Operator method) volume_read() (in module scico.examples) vsplit() (in module scico.numpy) vstack() (in module scico.numpy) W wald() (in module scico.random) weibull_min() (in module scico.random) where() (in module scico.numpy) X XRayTransform (class in scico.linop) (class in scico.linop.xray.astra) (class in scico.linop.xray.svmbir) Z z (scico.linop.optics.AngularSpectrumPropagator attribute) (scico.linop.optics.FraunhoferPropagator attribute) (scico.linop.optics.FresnelPropagator attribute) (scico.linop.optics.Propagator attribute) z_init() (scico.optimize.ADMM method) (scico.optimize.LinearizedADMM method) ZeroFunctional (class in scico.functional) zeros() (in module scico.numpy) zeros_like() (in module scico.numpy) zeta() (in module scico.scipy.special)